Index

_

__init__() (twodanalysis.BioPolymer2D method) (twodanalysis.Memb2D method)

A

add_defects() (twodanalysis.Memb2D.Memb2D method)

add_small_matrix() (twodanalysis.Memb2D.Memb2D static method) all_lip_order() (twodanalysis.Memb2D.Memb2D method)

B

BioPolymer2D (class in twodanalysis) (class in twodanalysis.BioPolymer2D)

build_name() (twodanalysis.Memb2D.Memb2D static method) build_resname() (twodanalysis.Memb2D.Memb2D static method) build_resname_head() (twodanalysis.Memb2D.Memb2D method)

C

computeRG2D() (twodanalysis.BioPolymer2D.BioPolymer2D method)

count_order() (twodanalysis.Memb2D.Memb2D static method) create_circle_array() (twodanalysis.Memb2D.Memb2D static method)

E

endT (twodanalysis.BioPolymer2D.BioPolymer2D property)

extend_data() (twodanalysis.Memb2D.Memb2D static method)

F

FilterMinFrames() (twodanalysis.BioPolymer2D.BioPolymer2D static method)

G

get_highest() (twodanalysis.Memb2D.Memb2D static method) get_indexes() (twodanalysis.Memb2D.Memb2D method) get_individual() (twodanalysis.Memb2D.Memb2D static method) getAreas() (twodanalysis.BioPolymer2D.BioPolymer2D static method) getCOMs() (twodanalysis.BioPolymer2D.BioPolymer2D method)

getHbonds() (twodanalysis.BioPolymer2D.BioPolymer2D method) getKDEAnalysis() (twodanalysis.BioPolymer2D.BioPolymer2D method) getPositions() (twodanalysis.BioPolymer2D.BioPolymer2D method) getRgs2D() (twodanalysis.BioPolymer2D.BioPolymer2D method) grid_apl() (twodanalysis.Memb2D.Memb2D method) guess_minmax_space() (twodanalysis.Memb2D.Memb2D method)

H

HbondsPerResidues() (twodanalysis.BioPolymer2D.BioPolymer2D method)

height_matrix() (twodanalysis.Memb2D.Memb2D method) histogram2D() (twodanalysis.Memb2D.Memb2D method)

I

individual_order_sn1() (twodanalysis.Memb2D.Memb2D method)

individual_order_sn2() (twodanalysis.Memb2D.Memb2D method) INFO() (twodanalysis.BioPolymer2D.BioPolymer2D method)

K

KDEAnalysisSelection() (twodanalysis.BioPolymer2D.BioPolymer2D method)

L

ListPathsInLevel() (twodanalysis.BioPolymer2D.BioPolymer2D static method)

M

makeCmapColor() (twodanalysis.BioPolymer2D.BioPolymer2D static method) map_voronoi() (twodanalysis.Memb2D.Memb2D method) map_voronoitest() (twodanalysis.Memb2D.Memb2D method) Memb2D (class in twodanalysis) (class in twodanalysis.Memb2D)

module twodanalysis twodanalysis.data twodanalysis.data.files

N

numpyhistogram2D() (twodanalysis.Memb2D.Memb2D method)

O

order_histogram() (twodanalysis.Memb2D.Memb2D method)

P

packing_defects() (twodanalysis.Memb2D.Memb2D method) packing_defects_stats() (twodanalysis.Memb2D.Memb2D method) plotHbondsPerResidues() (twodanalysis.BioPolymer2D.BioPolymer2D method)

plotPathsInLevel() (twodanalysis.BioPolymer2D.BioPolymer2D static method) PolarAnalysis() (twodanalysis.BioPolymer2D.BioPolymer2D method) print_dict() (twodanalysis.Memb2D.Memb2D static method) process_point() (twodanalysis.Memb2D.Memb2D method)

R

RgPerpvsRgsPar() (twodanalysis.BioPolymer2D.BioPolymer2D method)

S

startT (twodanalysis.BioPolymer2D.BioPolymer2D property)

stepT (twodanalysis.BioPolymer2D.BioPolymer2D property) surface() (twodanalysis.Memb2D.Memb2D method)

T

thickness() (twodanalysis.Memb2D.Memb2D method) twodanalysis module

twodanalysis.data module twodanalysis.data.files module

V

visualize_polarity() (twodanalysis.Memb2D.Memb2D method)

voronoi_apl() (twodanalysis.Memb2D.Memb2D method)

W

windows_apl() (twodanalysis.Memb2D.Memb2D method)